STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH98194.1Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (694 aa)    
Predicted Functional Partners:
KII00439.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
KII00112.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
KII00440.1
Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.993
KII00467.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.981
KIH97422.1
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.945
KIH96947.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.945
KIH99019.1
Anti-sigma B factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
 
 0.944
KIH98985.1
Anti-sigma factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
 
 0.942
KIH96640.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.935
ribA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
   
 0.929
Your Current Organism:
Streptomonospora alba
NCBI taxonomy Id: 183763
Other names: CCTCC AA 001013, DSM 44588, JCM 12680, S. alba, Streptimonospora albus, Streptomonospora alba Li et al. 2003, Streptomonospora albus, YIM 90003
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