STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH97958.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (578 aa)    
Predicted Functional Partners:
KIH96893.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.633
KIH96862.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.541
KIH98069.1
SARP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.525
KIH97875.1
Proline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.497
KIH97874.1
1-pyrroline-5-carboxylate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.491
KIH97221.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.483
KIH97347.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.440
KIH99919.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.435
KIH96483.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.405
KII00087.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.401
Your Current Organism:
Streptomonospora alba
NCBI taxonomy Id: 183763
Other names: CCTCC AA 001013, DSM 44588, JCM 12680, S. alba, Streptimonospora albus, Streptomonospora alba Li et al. 2003, Streptomonospora albus, YIM 90003
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.