Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KIH96493.1 | KIH97345.1 | LP52_24610 | LP52_19790 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.404 |
| KIH97345.1 | KIH96493.1 | LP52_19790 | LP52_24610 | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.404 |
| KIH97345.1 | KIH97358.1 | LP52_19790 | LP52_19800 | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.461 |
| KIH97345.1 | KIH98519.1 | LP52_19790 | LP52_12490 | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | CDP-glycerol glycerophosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.416 |
| KIH97345.1 | KIH99189.1 | LP52_19790 | LP52_08630 | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.431 |
| KIH97345.1 | coaE | LP52_19790 | LP52_19795 | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.714 |
| KIH97345.1 | rpsA | LP52_19790 | LP52_19785 | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.509 |
| KIH97345.1 | trmD | LP52_19790 | LP52_16620 | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.720 |
| KIH97358.1 | KIH97345.1 | LP52_19800 | LP52_19790 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.461 |
| KIH97358.1 | coaE | LP52_19800 | LP52_19795 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.496 |
| KIH98519.1 | KIH97345.1 | LP52_12490 | LP52_19790 | CDP-glycerol glycerophosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.416 |
| KIH99189.1 | KIH97345.1 | LP52_08630 | LP52_19790 | acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.431 |
| KIH99189.1 | rpsA | LP52_08630 | LP52_19785 | acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.490 |
| coaE | KIH97345.1 | LP52_19795 | LP52_19790 | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.714 |
| coaE | KIH97358.1 | LP52_19795 | LP52_19800 | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.496 |
| coaE | rpsA | LP52_19795 | LP52_19785 | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.668 |
| rpsA | KIH97345.1 | LP52_19785 | LP52_19790 | 30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. | GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.509 |
| rpsA | KIH99189.1 | LP52_19785 | LP52_08630 | 30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.490 |
| rpsA | coaE | LP52_19785 | LP52_19795 | 30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.668 |
| rpsA | trmD | LP52_19785 | LP52_16620 | 30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.918 |
page 1 of 2