STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH97212.1Cysteine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)    
Predicted Functional Partners:
KIH96513.1
Maleate cis-trans isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.761
KIH96514.1
Asp/Glu racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.760
KIH99250.1
acetyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.753
KIH96373.1
Modular polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.740
KIH98410.1
Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.726
KIH97566.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
   
 0.683
KII00533.1
Synthesizes isochorismate from chorismate as part of the biosynthesis of the siderophore 2,3-dihydroxybenzoate; can also be used in menaquinone synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.649
KIH96746.1
Isochorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.649
KIH99491.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.619
KIH96953.1
Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family.
    
  0.619
Your Current Organism:
Streptomonospora alba
NCBI taxonomy Id: 183763
Other names: CCTCC AA 001013, DSM 44588, JCM 12680, S. alba, Streptimonospora albus, Streptomonospora alba Li et al. 2003, Streptomonospora albus, YIM 90003
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