STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAT85876.1Nitrate reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1228 aa)    
Predicted Functional Partners:
OAT85877.1
Nitrate reductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OAT79827.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OAT85878.1
Nitrate reductase molybdenum cofactor assembly chaperone; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.998
OAT85879.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.974
OAT87097.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.854
OAT86680.1
Oxalate:formate antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.793
OAT85433.1
Oxalate:formate antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.793
OAT85266.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.793
OAT80411.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.792
OAT82975.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.792
Your Current Organism:
Desulfotomaculum copahuensis
NCBI taxonomy Id: 1838280
Other names: D. copahuensis, Desulfotomaculum sp. LMa1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.