STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macA_1Macrolide export protein MacA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (379 aa)    
Predicted Functional Partners:
AOS45007.1
Outer membrane channel protein.
  
   0.842
lolD_2
Lipoprotein-releasing system ATP-binding protein LolD.
 
   0.806
lolE_1
Lipoprotein-releasing system transmembrane protein LolE.
 
   0.761
czcB_2
Cobalt-zinc-cadmium resistance protein CzcB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.742
bepE_1
Efflux pump membrane transporter BepE; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
   0.710
bepE_2
Efflux pump membrane transporter BepE; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
   0.702
macB_7
Macrolide export ATP-binding/permease protein MacB.
  
   0.699
macB_6
Macrolide export ATP-binding/permease protein MacB.
  
   0.697
mexA
Multidrug resistance protein MexA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.690
macB_13
Macrolide export ATP-binding/permease protein MacB.
  
   0.676
Your Current Organism:
Lacunisphaera limnophila
NCBI taxonomy Id: 1838286
Other names: DSM 26815, L. limnophila, LMG 29469, LMG:29469, Opitutaceae bacterium IG16b, strain IG16b
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