STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOS45888.1Hypothetical protein. (383 aa)    
Predicted Functional Partners:
mshA_5
D-inositol-3-phosphate glycosyltransferase.
       0.773
AOS45893.1
Hypothetical protein.
  
    0.628
pglJ
N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase.
       0.608
epsJ
Putative glycosyltransferase EpsJ.
  
    0.587
AOS45889.1
Hypothetical protein.
  
    0.580
AOS45891.1
Hypothetical protein.
       0.572
AOS45892.1
Hypothetical protein.
  
    0.555
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
    0.549
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.487
AOS44994.1
NAD dependent epimerase/dehydratase family protein.
  
  
 0.459
Your Current Organism:
Lacunisphaera limnophila
NCBI taxonomy Id: 1838286
Other names: DSM 26815, L. limnophila, LMG 29469, LMG:29469, Opitutaceae bacterium IG16b, strain IG16b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.