STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APV45259.1Hypothetical protein. (327 aa)    
Predicted Functional Partners:
APV45260.1
Hypothetical protein.
       0.774
APV45261.1
Hypothetical protein.
       0.773
APV45262.1
Hypothetical protein.
       0.773
APV45263.1
DnaJ domain-containing protein.
       0.773
ruvB-4
KEGG: deb:DehaBAV1_0210 holliday junction DNA helicase RuvB.
       0.773
APV45265.1
Hypothetical protein.
       0.773
APV45258.1
Hypothetical protein.
       0.509
APV45266.1
Hypothetical protein.
       0.484
APV45267.1
Hypothetical protein.
       0.484
Your Current Organism:
Dehalogenimonas formicexedens
NCBI taxonomy Id: 1839801
Other names: D. formicexedens, Dehalogenimonas formicexedens Key et al. 2017, Dehalogenimonas sp. NSZ-14, HAMBI 3672, JCM 19277, VKM B-3058, strain NSZ-14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.