Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OFV66147.1 | OFV66310.1 | SBU_000689 | SBU_000852 | RNA methyltransferase. | Small GTP-binding protein domain protein. | 0.832 |
| OFV66147.1 | OFV66585.1 | SBU_000689 | SBU_000552 | RNA methyltransferase. | Protein belonging to Uncharacterized protein family UPF0251. | 0.758 |
| OFV66147.1 | OFV66828.1 | SBU_000689 | SBU_000121 | RNA methyltransferase. | KH domain protein, archaea. | 0.669 |
| OFV66147.1 | rtcA | SBU_000689 | SBU_001385 | RNA methyltransferase. | Ribosomal subunit interface protein; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing. | 0.842 |
| OFV66147.1 | trm1 | SBU_000689 | SBU_000029 | RNA methyltransferase. | tRNA (guanine-N2)-dimethyltransferase; Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | 0.667 |
| OFV66147.1 | truD | SBU_000689 | SBU_000354 | RNA methyltransferase. | tRNA pseudouridine synthase D; Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.445 |
| OFV66310.1 | OFV66147.1 | SBU_000852 | SBU_000689 | Small GTP-binding protein domain protein. | RNA methyltransferase. | 0.832 |
| OFV66310.1 | OFV66585.1 | SBU_000852 | SBU_000552 | Small GTP-binding protein domain protein. | Protein belonging to Uncharacterized protein family UPF0251. | 0.870 |
| OFV66310.1 | OFV66828.1 | SBU_000852 | SBU_000121 | Small GTP-binding protein domain protein. | KH domain protein, archaea. | 0.829 |
| OFV66310.1 | flpA | SBU_000852 | SBU_001486 | Small GTP-binding protein domain protein. | Fibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family. | 0.991 |
| OFV66310.1 | rtcA | SBU_000852 | SBU_001385 | Small GTP-binding protein domain protein. | Ribosomal subunit interface protein; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing. | 0.842 |
| OFV66310.1 | trm1 | SBU_000852 | SBU_000029 | Small GTP-binding protein domain protein. | tRNA (guanine-N2)-dimethyltransferase; Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | 0.706 |
| OFV66310.1 | truD | SBU_000852 | SBU_000354 | Small GTP-binding protein domain protein. | tRNA pseudouridine synthase D; Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.830 |
| OFV66585.1 | OFV66147.1 | SBU_000552 | SBU_000689 | Protein belonging to Uncharacterized protein family UPF0251. | RNA methyltransferase. | 0.758 |
| OFV66585.1 | OFV66310.1 | SBU_000552 | SBU_000852 | Protein belonging to Uncharacterized protein family UPF0251. | Small GTP-binding protein domain protein. | 0.870 |
| OFV66585.1 | OFV66828.1 | SBU_000552 | SBU_000121 | Protein belonging to Uncharacterized protein family UPF0251. | KH domain protein, archaea. | 0.888 |
| OFV66585.1 | flpA | SBU_000552 | SBU_001486 | Protein belonging to Uncharacterized protein family UPF0251. | Fibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family. | 0.400 |
| OFV66585.1 | rtcA | SBU_000552 | SBU_001385 | Protein belonging to Uncharacterized protein family UPF0251. | Ribosomal subunit interface protein; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing. | 0.822 |
| OFV66585.1 | trm1 | SBU_000552 | SBU_000029 | Protein belonging to Uncharacterized protein family UPF0251. | tRNA (guanine-N2)-dimethyltransferase; Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | 0.615 |
| OFV66585.1 | truD | SBU_000552 | SBU_000354 | Protein belonging to Uncharacterized protein family UPF0251. | tRNA pseudouridine synthase D; Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.666 |
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