STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFV65970.1Radical SAM protein. (246 aa)    
Predicted Functional Partners:
OFV65872.1
Anaerobic ribonucleoside-triphosphate reductase.
 
  
 0.774
rpl4
50S ribosomal protein L4P; Forms part of the polypeptide exit tunnel.
    
 0.707
ubiX
Phenylacrylic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
       0.554
OFV65969.1
Transcriptional regulator; Uncharacterized conserved protein UCP037373, transcriptional regulator, AF0674.
       0.545
rps24e
Ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.
       0.532
rps27ae
Ribosomal protein S27a domain protein; Belongs to the eukaryotic ribosomal protein eS31 family.
       0.532
OFV65973.1
Glycosyl transferase family 2.
       0.528
OFV65991.1
Uroporphyrinogen decarboxylase family protein.
 
  
 0.527
OFV66483.1
methylcobamide:CoM methyltransferase.
 
  
 0.524
hisI
phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
  
    0.524
Your Current Organism:
Syntrophoarchaeum butanivorans
NCBI taxonomy Id: 1839936
Other names: C. Syntrophoarchaeum butanivorans, Candidatus Syntrophoarchaeum butanivorans, Euryarchaeota archaeon BOX1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.