STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT83416.1Membrane protein. (758 aa)    
Predicted Functional Partners:
GAT80529.1
Nitrogen fixation protein NifU.
   
    0.873
pheT
phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.760
GAT82611.1
Mobile element transfer protein.
  
     0.705
GAT82817.1
Transferase.
  
     0.701
GAT84655.1
Hypothetical protein.
  
   
 0.675
GAT84182.1
Membrane protein.
  
     0.628
GAT84927.1
Mobile element transfer protein.
  
     0.614
GAT84181.1
Membrane protein.
  
     0.612
GAT81031.1
Hypothetical protein.
  
     0.606
GAT82588.1
Hypothetical protein Z951_35430.
  
     0.587
Your Current Organism:
Streptomyces sp. F3
NCBI taxonomy Id: 1840095
Other names: S. sp. F-3, Streptomyces sp. F-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.