STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
map3k13Mitogen-activated protein kinase kinase kinase. (1018 aa)    
Predicted Functional Partners:
map2k7
Mitogen-activated protein kinase kinase 7.
    
0.932
mycbp2
MYC binding protein 2.
    
 
 0.613
MAPK8IP1
Mitogen-activated protein kinase 8 interacting protein 1.
    
 
 0.537
fbxo45
F-box protein 45.
    
 
 0.423
ZNF516
Zinc finger protein 516.
      
 0.412
vps8
VPS8 subunit of CORVET complex.
      
 0.407
Your Current Organism:
Seriola lalandi
NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.