STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSLDP00000014135SAM domain-containing protein. (89 aa)    
Predicted Functional Partners:
ENSSLDP00000012324
Bmi1 polycomb ring finger oncogene 1a.
    
 0.655
cbx8
Chromobox homolog 8b.
    
 0.651
LOC111667559
Chromobox homolog 8a (Pc class homolog, Drosophila).
    
 0.651
ENSSLDP00000015103
Chromobox homolog 6a.
    
 0.643
LOC111655477
Chromobox 4.
    
 0.630
LOC111667573
Chromobox homolog 4 (Pc class homolog, Drosophila).
    
 0.630
rnf2
Ring finger protein 2.
    
 0.590
RING1
Ring finger protein 1.
    
 0.590
LOC111660419
Polycomb group ring finger 2.
    
 0.583
pcgf1
Polycomb group ring finger 1.
    
 0.560
Your Current Organism:
Seriola lalandi
NCBI taxonomy Id: 1841481
Other names: S. lalandi dorsalis, Seriola dorsalis, Seriola lalandi dorsalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.