STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mbhJ_1Putative membrane-bound hydrogenase subunit mbhJ; OdinLCB4_02550 NODE_2_length_130697_cov_3.16084_ID_3_90; IPR006137; arCOG01553. (138 aa)    
Predicted Functional Partners:
hycE_2
Formate hydrogenlyase subunit 5 precursor; OdinLCB4_14620 NODE_1_length_1181447_cov_4.38286_ID_1_1118; IPR001135;IPR001501;IPR029014;IPR001268; arCOG01547.
 0.999
mbhL
Membrane-bound hydrogenase subunit alpha; OdinLCB4_02560 NODE_2_length_130697_cov_3.16084_ID_3_91; IPR001501;IPR029014;IPR018194;IPR001135; arCOG01547.
 0.998
hycE_1
Formate hydrogenlyase subunit 5 precursor; OdinLCB4_14520 NODE_1_length_1181447_cov_4.38286_ID_1_1108; IPR001135;IPR001268;IPR029014;IPR001501;IPR018194;IPR02039 6; arCOG01547.
 0.993
mt-nd1
NADH-ubiquinone oxidoreductase chain 1; OdinLCB4_02570 NODE_2_length_130697_cov_3.16084_ID_3_92; IPR001694; arCOG01545.
 
 0.992
ndhI
NAD(P)H-quinone oxidoreductase subunit I; OdinLCB4_02580 NODE_2_length_130697_cov_3.16084_ID_3_93; IPR017896;IPR017900; arCOG01543.
  
 0.971
nuoC
NADH-quinone oxidoreductase subunit C/D; OdinLCB4_02500 NODE_2_length_130697_cov_3.16084_ID_3_85; IPR001268; arCOG01551.
  
 0.891
mrpA_2
Na(+)/H(+) antiporter subunit A; OdinLCB4_02530 NODE_2_length_130697_cov_3.16084_ID_3_88; IPR001750;IPR003918; arCOG01537.
  
 0.890
fpoN
F(420)H(2) dehydrogenase subunit N; OdinLCB4_14780 NODE_1_length_1181447_cov_4.38286_ID_1_1134; IPR001516;IPR001750; arCOG01537.
  
 0.890
nuoI_1
NADH-quinone oxidoreductase subunit I; OdinLCB4_14500 NODE_1_length_1181447_cov_4.38286_ID_1_1106; IPR017896;IPR017900; arCOG01543.
  
 0.877
nuoI_2
NADH-quinone oxidoreductase subunit I; OdinLCB4_14600 NODE_1_length_1181447_cov_4.38286_ID_1_1116; IPR017896;IPR017900; arCOG01543.
  
 0.877
Your Current Organism:
Odinarchaeota archaeon
NCBI taxonomy Id: 1841599
Other names: C. Odinarchaeota archaeon LCB_4, Candidatus Odinarchaeota archaeon LCB_4, archaeon Odin LCB_4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.