STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLS17163.1Hypothetical protein; OdinLCB4_03670 NODE_1_length_1181447_cov_4.38286_ID_1_56; arCOG03188. (550 aa)    
Predicted Functional Partners:
rimO_2
Ribosomal protein S12 methylthiotransferase RimO; OdinLCB4_03660 NODE_1_length_1181447_cov_4.38286_ID_1_55; IPR006158;IPR006638;IPR023970;IPR023404;IPR007197; arCOG01356.
       0.658
tehB
Putative S-adenosyl-L-methionine-dependent methyltransferase TehB; OdinLCB4_03650 NODE_1_length_1181447_cov_4.38286_ID_1_54; IPR025714;IPR029063; arCOG04347.
       0.558
k-ras_2
GTPase KRas precursor; OdinLCB4_03640 NODE_1_length_1181447_cov_4.38286_ID_1_53; IPR001806;IPR027417;IPR020849;IPR003578;IPR003579;IPR00522 5; arCOG00362.
       0.403
Your Current Organism:
Odinarchaeota archaeon
NCBI taxonomy Id: 1841599
Other names: C. Odinarchaeota archaeon LCB_4, Candidatus Odinarchaeota archaeon LCB_4, archaeon Odin LCB_4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.