STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLS17267.1Hypothetical protein; OdinLCB4_04720 NODE_1_length_1181447_cov_4.38286_ID_1_161; IPR007000; arCOG06935. (458 aa)    
Predicted Functional Partners:
hypB
Putative hydrogenase nickel incorporation protein HypB; OdinLCB4_04710 NODE_1_length_1181447_cov_4.38286_ID_1_160; IPR027417;IPR004392;IPR003495; arCOG01231.
 
     0.619
glmU_1
Bifunctional protein GlmU; OdinLCB4_04730 NODE_1_length_1181447_cov_4.38286_ID_1_162; IPR029044;IPR023915;IPR005835;IPR011004;IPR001451; arCOG00668.
       0.529
Your Current Organism:
Odinarchaeota archaeon
NCBI taxonomy Id: 1841599
Other names: C. Odinarchaeota archaeon LCB_4, Candidatus Odinarchaeota archaeon LCB_4, archaeon Odin LCB_4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.