STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLS17276.1Hypothetical protein; OdinLCB4_04810 NODE_1_length_1181447_cov_4.38286_ID_1_170; IPR000892; arCOG04305. (92 aa)    
Predicted Functional Partners:
rps7
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family.
  
 0.999
OLS18766.1
Hypothetical protein; OdinLCB4_01130 NODE_3_length_93594_cov_3.76123_ID_5_71; IPR004977; arCOG04327.
   
 0.999
rpl13e
Hypothetical protein; OdinLCB4_05490 NODE_1_length_1181447_cov_4.38286_ID_1_236; IPR001380;IPR018256; arCOG01013; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 
 0.999
rps12
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.
   
 0.999
rpl30e
50S ribosomal protein L30e; OdinLCB4_05870 NODE_1_length_1181447_cov_4.38286_ID_1_274; IPR029064;IPR000231;IPR004038;IPR022991; arCOG01752; Belongs to the eukaryotic ribosomal protein eL30 family.
   
 
 0.999
rps10
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
   
 0.999
rps19e
30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.
  
 0.999
rpl31e
50S ribosomal protein L31e; OdinLCB4_07570 NODE_1_length_1181447_cov_4.38286_ID_1_434; IPR000054;IPR023621; arCOG04473; Belongs to the ribosomal protein L31e family.
   
 
 0.999
rpl12
50S ribosomal protein L12; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 
 0.999
rps17e
30S ribosomal protein S17e; OdinLCB4_09130 NODE_1_length_1181447_cov_4.38286_ID_1_585; IPR001210;IPR018273; arCOG01885; Belongs to the eukaryotic ribosomal protein eS17 family.
  
 0.999
Your Current Organism:
Odinarchaeota archaeon
NCBI taxonomy Id: 1841599
Other names: C. Odinarchaeota archaeon LCB_4, Candidatus Odinarchaeota archaeon LCB_4, archaeon Odin LCB_4
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.