STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmpTThiamine precursor transporter HmpT; OdinLCB4_06460 NODE_1_length_1181447_cov_4.38286_ID_1_330; IPR009825; arCOG05752. (180 aa)    
Predicted Functional Partners:
ecfT_2
Energy-coupling factor transporter transmembrane protein EcfT; OdinLCB4_11580 NODE_1_length_1181447_cov_4.38286_ID_1_820; IPR003339; arCOG02250.
 
 0.895
ecfT_1
Energy-coupling factor transporter transmembrane protein EcfT; OdinLCB4_02660 NODE_2_length_130697_cov_3.16084_ID_3_100; IPR003339;IPR012809; arCOG02250.
  
 0.869
ecfA2
Energy-coupling factor transporter ATP-binding protein EcfA2; OdinLCB4_11560 NODE_1_length_1181447_cov_4.38286_ID_1_818; IPR027417;IPR003439;IPR017871;IPR003593; arCOG00185.
 
 
 
 0.752
cbiO_2
Cobalt import ATP-binding protein CbiO; OdinLCB4_11570 NODE_1_length_1181447_cov_4.38286_ID_1_819; IPR017871;IPR003439;IPR003593;IPR027417; arCOG00202.
 
 
 
 0.695
cbiO_1
Cobalt import ATP-binding protein CbiO; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
 
 0.683
smc_2
Chromosome partition protein Smc; OdinLCB4_02420 NODE_2_length_130697_cov_3.16084_ID_3_77; IPR027417;IPR003395; arCOG00373.
   
 
 0.639
thrC_1
Threonine synthase; OdinLCB4_06470 NODE_1_length_1181447_cov_4.38286_ID_1_331; IPR011991;IPR001926;IPR001845;IPR004450;IPR005149; arCOG00001;arCOG01434.
       0.603
thiD
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; OdinLCB4_04180 NODE_1_length_1181447_cov_4.38286_ID_1_107; IPR013749;IPR004399;IPR001303;IPR029056; arCOG00020.
     
 0.455
OLS17442.1
Soluble hydrogenase 42 kDa subunit; OdinLCB4_06520 NODE_1_length_1181447_cov_4.38286_ID_1_336; IPR000192;IPR015424;IPR024169;IPR015421;IPR020578;IPR01542 2; arCOG00082.
       0.450
OLS17574.1
Hypothetical protein; OdinLCB4_07920 NODE_1_length_1181447_cov_4.38286_ID_1_468; IPR010387; arCOG07487.
  
     0.439
Your Current Organism:
Odinarchaeota archaeon
NCBI taxonomy Id: 1841599
Other names: C. Odinarchaeota archaeon LCB_4, Candidatus Odinarchaeota archaeon LCB_4, archaeon Odin LCB_4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.