STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metG_1Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily. (668 aa)    
Predicted Functional Partners:
leuS
Leucine--tRNA ligase; OdinLCB4_13170 NODE_1_length_1181447_cov_4.38286_ID_1_973; IPR020791;IPR009080;IPR002300;IPR004493;IPR009008;IPR01315 5;IPR014729; arCOG00809; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.916
metG_2
Methionine--tRNA ligase; OdinLCB4_08910 NODE_1_length_1181447_cov_4.38286_ID_1_565; IPR012340;IPR002547;IPR004495; arCOG01136.
 
     0.883
aspS
Aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).
  
 
 0.878
argS
Arginine--tRNA ligase; OdinLCB4_14690 NODE_1_length_1181447_cov_4.38286_ID_1_1125; IPR001278;IPR009080;IPR005148;IPR001412;IPR008909;IPR01472 9; arCOG00487; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.839
gltX
Glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
 
 0.830
ileS
Isoleucine--tRNA ligase; OdinLCB4_04160 NODE_1_length_1181447_cov_4.38286_ID_1_105; IPR009080;IPR023585;IPR009008;IPR014729;IPR002301;IPR00141 2;IPR013155;IPR002300; arCOG00807; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
0.823
proS
Proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
 
 0.818
tyrS
Tyrosine--tRNA ligase; OdinLCB4_06070 NODE_1_length_1181447_cov_4.38286_ID_1_291; IPR014729;IPR023678;IPR023617;IPR002305;IPR002306; arCOG01886.
 
 0.772
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.713
metE
Putative methylcobalamin:homocysteine methyltransferase; OdinLCB4_03220 NODE_1_length_1181447_cov_4.38286_ID_1_11; IPR002629; arCOG01876.
 
  
 0.678
Your Current Organism:
Odinarchaeota archaeon
NCBI taxonomy Id: 1841599
Other names: C. Odinarchaeota archaeon LCB_4, Candidatus Odinarchaeota archaeon LCB_4, archaeon Odin LCB_4
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