STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macB_2Macrolide export ATP-binding/permease protein MacB; OdinLCB4_08580 NODE_1_length_1181447_cov_4.38286_ID_1_533; IPR003838;IPR025857; arCOG02312. (378 aa)    
Predicted Functional Partners:
OLS17640.1
Putative ABC transporter ATP-binding protein; OdinLCB4_08590 NODE_1_length_1181447_cov_4.38286_ID_1_534; IPR017871;IPR003439;IPR027417;IPR003593; arCOG00922.
 
 0.991
OLS17389.1
Putative ABC transporter ATP-binding protein; OdinLCB4_05980 NODE_1_length_1181447_cov_4.38286_ID_1_283; IPR003439;IPR017871;IPR027417;IPR003593; arCOG00922.
 
 0.962
OLS17115.1
Putative ABC transporter ATP-binding protein; OdinLCB4_03190 NODE_1_length_1181447_cov_4.38286_ID_1_8; IPR027417;IPR003439;IPR003593; arCOG00922.
 
 0.959
dppB
Dipeptide transport system permease protein DppB; OdinLCB4_03130 NODE_1_length_1181447_cov_4.38286_ID_1_2; IPR000515; arCOG00751.
    
 0.651
argD
Acetylornithine/acetyl-lysine aminotransferase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. LysJ subfamily.
    
  0.638
metN
Methionine import ATP-binding protein MetN; OdinLCB4_08620 NODE_1_length_1181447_cov_4.38286_ID_1_537; IPR027417;IPR003593;IPR003439; arCOG00175.
 
     0.618
OLS18696.1
Hypothetical protein; OdinLCB4_00430 NODE_3_length_93594_cov_3.76123_ID_5_1; IPR000515; arCOG00748.
   
 
  0.599
gsiD
Glutathione transport system permease protein GsiD; OdinLCB4_03120 NODE_1_length_1181447_cov_4.38286_ID_1_1; IPR000515;IPR025966; arCOG00748.
   
 
  0.599
OLS17641.1
Hypothetical protein; OdinLCB4_08600 NODE_1_length_1181447_cov_4.38286_ID_1_535; IPR024370; arCOG00229.
       0.584
cysW
Sulfate transport system permease protein CysW; OdinLCB4_08610 NODE_1_length_1181447_cov_4.38286_ID_1_536; IPR000515; arCOG00166.
       0.558
Your Current Organism:
Odinarchaeota archaeon
NCBI taxonomy Id: 1841599
Other names: C. Odinarchaeota archaeon LCB_4, Candidatus Odinarchaeota archaeon LCB_4, archaeon Odin LCB_4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.