STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrBAspartate carbamoyltransferase; OdinLCB4_10040 NODE_1_length_1181447_cov_4.38286_ID_1_671; IPR002082;IPR006130;IPR006132;IPR006131; arCOG00911. (308 aa)    
Predicted Functional Partners:
pyrD
Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
  
 
 0.999
allB
Allantoinase; OdinLCB4_06900 NODE_1_length_1181447_cov_4.38286_ID_1_372; IPR004722;IPR006680;IPR011059;IPR002195; arCOG00689.
 0.999
carA
Carbamoyl-phosphate synthase small chain; OdinLCB4_13990 NODE_1_length_1181447_cov_4.38286_ID_1_1055; IPR002474;IPR029062;IPR017926;IPR006274; arCOG00064; Belongs to the CarA family.
 
 
 0.999
carB_2
Carbamoyl-phosphate synthase large chain; OdinLCB4_14000 NODE_1_length_1181447_cov_4.38286_ID_1_1056; IPR005480;IPR005479;IPR011607;IPR013816;IPR016185;IPR00627 5;IPR005483;IPR011761;IPR013815; arCOG01594; Belongs to the CarB family.
 
 0.999
pyrF
Orotidine 5'-phosphate decarboxylase; OdinLCB4_14920 NODE_1_length_1181447_cov_4.38286_ID_1_1148; IPR013785;IPR018089;IPR001754;IPR011060; arCOG00081.
 
 
 0.999
pyrI
Aspartate carbamoyltransferase regulatory chain; Involved in allosteric regulation of aspartate carbamoyltransferase.
 0.998
pyrE_1
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
 0.981
shyC_1
Sulfhydrogenase 2 subunit gamma; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
  
 
 0.894
shyC_2
Sulfhydrogenase 2 subunit gamma; OdinLCB4_08020 NODE_1_length_1181447_cov_4.38286_ID_1_478; IPR008333;IPR001709;IPR019480;IPR012165;IPR001221;IPR01793 8;IPR001433;IPR017927; arCOG02199.
  
 
 0.894
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.849
Your Current Organism:
Odinarchaeota archaeon
NCBI taxonomy Id: 1841599
Other names: C. Odinarchaeota archaeon LCB_4, Candidatus Odinarchaeota archaeon LCB_4, archaeon Odin LCB_4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.