STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hspA_2Spore protein SP21; OdinLCB4_10640 NODE_1_length_1181447_cov_4.38286_ID_1_727; IPR008978;IPR002068;IPR031107; arCOG01832; Belongs to the small heat shock protein (HSP20) family. (149 aa)    
Predicted Functional Partners:
OLS17831.1
Hypothetical protein; OdinLCB4_10630 NODE_1_length_1181447_cov_4.38286_ID_1_726; IPR019151; arCOG00347.
 
    0.792
gatC
Glutamyl-tRNA(Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
     
 0.581
gatA_1
Glutamyl-tRNA(Gln) amidotransferase subunit A; OdinLCB4_10600 NODE_1_length_1181447_cov_4.38286_ID_1_723; IPR023631;IPR000120; arCOG01717.
       0.579
gatA_2
Glutamyl-tRNA(Gln) amidotransferase subunit A; OdinLCB4_10610 NODE_1_length_1181447_cov_4.38286_ID_1_724; IPR023631;IPR000120; arCOG01717.
       0.579
gatB
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
       0.575
dnaK
Chaperone protein DnaK; Acts as a chaperone.
  
 
 0.555
dnaJ
Chaperone protein DnaJ; OdinLCB4_05080 NODE_1_length_1181447_cov_4.38286_ID_1_197; IPR001305;IPR008971;IPR012724;IPR001623;IPR002939;IPR01825 3; arCOG06880.
 
 
 0.545
grpE
Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...]
 
  
 0.522
Your Current Organism:
Odinarchaeota archaeon
NCBI taxonomy Id: 1841599
Other names: C. Odinarchaeota archaeon LCB_4, Candidatus Odinarchaeota archaeon LCB_4, archaeon Odin LCB_4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.