STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ef1bElongation factor 1-beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. (88 aa)    
Predicted Functional Partners:
rps17e
30S ribosomal protein S17e; OdinLCB4_09130 NODE_1_length_1181447_cov_4.38286_ID_1_585; IPR001210;IPR018273; arCOG01885; Belongs to the eukaryotic ribosomal protein eS17 family.
  
   0.999
rpl21e
50S ribosomal protein L21e; OdinLCB4_10550 NODE_1_length_1181447_cov_4.38286_ID_1_718; IPR008991;IPR018259;IPR001147;IPR022856; arCOG04129; Belongs to the eukaryotic ribosomal protein eL21 family.
  
 
 0.999
OLS17879.1
50S ribosomal protein L24e; OdinLCB4_11120 NODE_1_length_1181447_cov_4.38286_ID_1_774; IPR023441;IPR000988;IPR011017; arCOG01950.
  
   0.999
rpl15e
50S ribosomal protein L15e; OdinLCB4_11410 NODE_1_length_1181447_cov_4.38286_ID_1_803; IPR020926;IPR000439;IPR024794;IPR012678; arCOG04209; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.999
rps3
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
  
   0.999
rpl14
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.999
rps17
30S ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
  
   0.997
rpl29
50S ribosomal protein L29P; OdinLCB4_12710 NODE_1_length_1181447_cov_4.38286_ID_1_928; IPR001854;IPR018254; arCOG00785; Belongs to the universal ribosomal protein uL29 family.
  
 
 0.992
tuf
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
   
 0.990
rps6e
30S ribosomal protein S6e; OdinLCB4_11150 NODE_1_length_1181447_cov_4.38286_ID_1_777; IPR001377;IPR020924; arCOG01946; Belongs to the eukaryotic ribosomal protein eS6 family.
  
  
 0.990
Your Current Organism:
Odinarchaeota archaeon
NCBI taxonomy Id: 1841599
Other names: C. Odinarchaeota archaeon LCB_4, Candidatus Odinarchaeota archaeon LCB_4, archaeon Odin LCB_4
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.