STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLS17861.1Hypothetical protein; OdinLCB4_10940 NODE_1_length_1181447_cov_4.38286_ID_1_756; IPR009825; arCOG06562. (251 aa)    
Predicted Functional Partners:
mer_2
5,10-methylenetetrahydromethanopterin reductase; OdinLCB4_10950 NODE_1_length_1181447_cov_4.38286_ID_1_757; IPR011251; arCOG02410.
       0.723
mer_3
5,10-methylenetetrahydromethanopterin reductase; OdinLCB4_10960 NODE_1_length_1181447_cov_4.38286_ID_1_758; IPR011251; arCOG02410.
       0.723
OLS17860.1
Hypothetical protein; OdinLCB4_10930 NODE_1_length_1181447_cov_4.38286_ID_1_755.
       0.546
mptD
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD).
       0.525
OLS17864.1
Putative NOP5 family protein; OdinLCB4_10970 NODE_1_length_1181447_cov_4.38286_ID_1_759; IPR002687;IPR012976; arCOG01923.
       0.482
flpA
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family.
       0.482
OLS17866.1
NAD-dependent malic enzyme; OdinLCB4_10990 NODE_1_length_1181447_cov_4.38286_ID_1_761; IPR001891;IPR012301;IPR012302;IPR016040; arCOG00853.
       0.427
Your Current Organism:
Odinarchaeota archaeon
NCBI taxonomy Id: 1841599
Other names: C. Odinarchaeota archaeon LCB_4, Candidatus Odinarchaeota archaeon LCB_4, archaeon Odin LCB_4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.