STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLS18152.1Hypothetical protein; OdinLCB4_13910 NODE_1_length_1181447_cov_4.38286_ID_1_1047; IPR029062; arCOG01314. (431 aa)    
Predicted Functional Partners:
OLS18154.1
Hypothetical protein; OdinLCB4_13930 NODE_1_length_1181447_cov_4.38286_ID_1_1049; IPR002035;IPR002881; arCOG02745.
 
    0.875
OLS18151.1
Hypothetical protein; OdinLCB4_13900 NODE_1_length_1181447_cov_4.38286_ID_1_1046; IPR003344;IPR008964;IPR002931; arCOG02169.
 
     0.841
ravA
ATPase RavA; OdinLCB4_13920 NODE_1_length_1181447_cov_4.38286_ID_1_1048; IPR011703;IPR027417;IPR003593;IPR016366; arCOG00434.
       0.838
OLS18155.1
Hypothetical protein; OdinLCB4_13940 NODE_1_length_1181447_cov_4.38286_ID_1_1050.
       0.731
mutS2
DNA-binding protein MutS2; Has ATPase and non-specific DNA-binding activities. Belongs to the DNA mismatch repair MutS family. Archaeal Muts2 subfamily.
  
     0.526
OLS18150.1
Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
       0.524
OLS18324.1
Putative ski2-type helicase; OdinLCB4_15630 NODE_1_length_1181447_cov_4.38286_ID_1_1219; IPR014001;IPR001650;IPR027417;IPR011545; arCOG00554.
  
     0.505
OLS18156.1
Hypothetical protein; OdinLCB4_13950 NODE_1_length_1181447_cov_4.38286_ID_1_1051.
       0.497
OLS18251.1
Hypothetical protein; OdinLCB4_14900 NODE_1_length_1181447_cov_4.38286_ID_1_1146; IPR029062; arCOG01314;arCOG07164.
  
     0.414
Your Current Organism:
Odinarchaeota archaeon
NCBI taxonomy Id: 1841599
Other names: C. Odinarchaeota archaeon LCB_4, Candidatus Odinarchaeota archaeon LCB_4, archaeon Odin LCB_4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.