STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLS18287.1Putative HTH-type transcriptional regulator; OdinLCB4_15260 NODE_1_length_1181447_cov_4.38286_ID_1_1182; IPR019887;IPR011008; arCOG01117. (88 aa)    
Predicted Functional Partners:
yhdG_2
Putative amino acid permease YhdG; OdinLCB4_15250 NODE_1_length_1181447_cov_4.38286_ID_1_1181; IPR002293; arCOG00009.
  
  
 0.802
OLS18288.1
Hypothetical protein; OdinLCB4_15270 NODE_1_length_1181447_cov_4.38286_ID_1_1183; IPR006016;IPR014729; arCOG00449.
       0.773
OLS17155.1
Hypothetical protein; OdinLCB4_03590 NODE_1_length_1181447_cov_4.38286_ID_1_48; IPR016102;IPR013816;IPR003781;IPR016040;IPR011761;IPR01408 9; arCOG01340.
    
  0.713
OLS17409.1
Acetyltransferase Pat; OdinLCB4_06190 NODE_1_length_1181447_cov_4.38286_ID_1_303; IPR016102;IPR011761;IPR016181;IPR003781;IPR016040;IPR00018 2;IPR013815;IPR014089; arCOG00834;arCOG01340.
    
  0.713
znuC
High-affinity zinc uptake system ATP-binding protein ZnuC; OdinLCB4_15230 NODE_1_length_1181447_cov_4.38286_ID_1_1179; IPR003439;IPR017871;IPR003593;IPR027417; arCOG00201.
  
    0.574
mntB
Manganese transport system membrane protein MntB; OdinLCB4_15240 NODE_1_length_1181447_cov_4.38286_ID_1_1180; IPR029022;IPR001626; arCOG01006.
       0.556
OLS18283.1
Putative periplasmic iron-binding protein precursor; OdinLCB4_15220 NODE_1_length_1181447_cov_4.38286_ID_1_1178; IPR006128;IPR006129;IPR006127; arCOG01005.
       0.535
truB
Putative tRNA pseudouridine synthase B; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.
    
  0.456
thiD
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; OdinLCB4_04180 NODE_1_length_1181447_cov_4.38286_ID_1_107; IPR013749;IPR004399;IPR001303;IPR029056; arCOG00020.
    
  0.420
OLS18282.1
Putative nickel-responsive regulator; OdinLCB4_15210 NODE_1_length_1181447_cov_4.38286_ID_1_1177; IPR014864;IPR002145;IPR013321;IPR010985; arCOG01008.
  
  
 0.408
Your Current Organism:
Odinarchaeota archaeon
NCBI taxonomy Id: 1841599
Other names: C. Odinarchaeota archaeon LCB_4, Candidatus Odinarchaeota archaeon LCB_4, archaeon Odin LCB_4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.