STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODA32663.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (883 aa)    
Predicted Functional Partners:
ODA32662.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.956
ODA32664.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.919
ODA32665.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.861
ODA29794.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.768
ODA34915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.755
ODA29795.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.754
ODA32842.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.749
ODA29115.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.743
ODA30584.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.740
ODA34896.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.734
Your Current Organism:
Planctopirus hydrillae
NCBI taxonomy Id: 1841610
Other names: KCTC 42880, LMG 29153, LMG:29153, P. hydrillae, Planctomyces sp. JC280, Planctopirus hydrillae Yadav et al. 2018, Planctopirus sp. JC280, strain JC280
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