STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCJ00467.1Spermidine/putrescine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)    
Predicted Functional Partners:
OCJ07042.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.877
OCJ07043.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.868
OCJ10315.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.821
OCJ00466.1
Spermidine/putrescine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.811
OCJ00465.1
Polyamine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.767
OCJ00468.1
Spermidine/putrescine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
  
 
  0.762
OCJ07045.1
Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 
  0.741
OCJ10314.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.702
OCJ00470.1
Methylhydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.679
OCJ00469.1
Methylhydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.627
Your Current Organism:
Rhizobium sp. AC2796
NCBI taxonomy Id: 1841653
Other names: R. sp. AC27/96, Rhizobium sp. AC27/96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.