STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCJ04223.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)    
Predicted Functional Partners:
OCJ04222.1
VWA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.953
OCJ04220.1
4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.916
OCJ04461.1
XdhC/CoxI family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.914
OCJ04221.1
XdhC/CoxF family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.906
OCJ17470.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.816
OCJ03035.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.801
OCJ04219.1
Competence protein TfoX; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.782
OCJ03036.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.779
OCJ04224.1
4-hydroxyphenylacetate 3-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.759
OCJ14492.1
Decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.657
Your Current Organism:
Rhizobium sp. AC4496
NCBI taxonomy Id: 1841654
Other names: R. sp. AC44/96, Rhizobium sp. AC44/96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.