STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900128455_00595Unannotated protein. (1041 aa)    
Predicted Functional Partners:
GCA_900128455_00596
Unannotated protein.
 
     0.959
GCA_900128455_00598
Unannotated protein.
 
    0.913
GCA_900128455_00423
Unannotated protein.
 
  
 0.840
GCA_900128455_00597
Unannotated protein.
 
    
0.827
GCA_900128455_03113
Unannotated protein.
 
  
 0.779
GCA_900128455_00219
Unannotated protein.
 
     0.770
GCA_900128455_00555
Unannotated protein.
 
     0.762
GCA_900128455_03365
Unannotated protein.
  
     0.759
GCA_900128455_00422
Unannotated protein.
  
 
 
 0.751
GCA_900128455_03024
Unannotated protein.
  
     0.745
Your Current Organism:
Bacteroides mediterraneensis
NCBI taxonomy Id: 1841856
Other names: B. mediterraneensis, Bacteroides sp. Marseille-P2644, CSUR P2644, DSM 103033, strain Marseille-P2644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.