STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900128455_01283Unannotated protein. (154 aa)    
Predicted Functional Partners:
GCA_900128455_03449
Unannotated protein.
    
 0.729
GCA_900128455_01779
Unannotated protein.
    
 0.698
GCA_900128455_02882
Unannotated protein.
  
 
 0.643
GCA_900128455_03020
Unannotated protein.
  
 
 0.643
GCA_900128455_02029
Unannotated protein.
  
 
 0.535
GCA_900128455_02775
Unannotated protein.
   
 
 0.527
GCA_900128455_01155
Unannotated protein.
     
 0.523
GCA_900128455_00889
Unannotated protein.
  
 
 0.521
GCA_900128455_00387
Unannotated protein.
    
 0.518
GCA_900128455_00080
Unannotated protein.
  
 
 0.513
Your Current Organism:
Bacteroides mediterraneensis
NCBI taxonomy Id: 1841856
Other names: B. mediterraneensis, Bacteroides sp. Marseille-P2644, CSUR P2644, DSM 103033, strain Marseille-P2644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.