STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900091655_02835Unannotated protein. (157 aa)    
Predicted Functional Partners:
GCA_900091655_02838
Unannotated protein.
 
 
 0.977
GCA_900091655_02836
Unannotated protein.
 
     0.950
GCA_900091655_02792
Unannotated protein.
 
   0.882
GCA_900091655_02483
Unannotated protein.
  
     0.774
GCA_900091655_03595
Unannotated protein.
  
     0.772
GCA_900091655_02837
Unannotated protein.
 
     0.761
GCA_900091655_03635
Unannotated protein.
  
     0.736
GCA_900091655_00202
Unannotated protein.
  
 
 0.723
GCA_900091655_02363
Unannotated protein.
  
 
 0.723
GCA_900091655_01668
Unannotated protein.
 
   0.676
Your Current Organism:
Culturomica massiliensis
NCBI taxonomy Id: 1841857
Other names: C. massiliensis, CSUR P2698, DSM 103121, Odoribacter sp. Marseille-P2698, strain Marseille-P2698
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.