STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900091655_03452Unannotated protein. (408 aa)    
Predicted Functional Partners:
GCA_900091655_02286
Unannotated protein.
  
 0.716
GCA_900091655_03451
Unannotated protein.
       0.701
GCA_900091655_00522
Unannotated protein.
  
 
 0.635
GCA_900091655_03450
Unannotated protein.
       0.562
GCA_900091655_01216
Unannotated protein.
    
 0.551
GCA_900091655_00296
Unannotated protein.
  
    0.547
GCA_900091655_01409
Unannotated protein.
  
 
 0.547
GCA_900091655_01611
Unannotated protein.
  
 
 0.547
GCA_900091655_02109
Unannotated protein.
    
  0.543
GCA_900091655_03449
Unannotated protein.
  
    0.524
Your Current Organism:
Culturomica massiliensis
NCBI taxonomy Id: 1841857
Other names: C. massiliensis, CSUR P2698, DSM 103121, Odoribacter sp. Marseille-P2698, strain Marseille-P2698
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.