STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNAB215_1589Unannotated protein. (161 aa)    
Predicted Functional Partners:
rplF
Unannotated protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
   
 0.886
MNAB215_1590
Unannotated protein.
       0.773
MNAB215_4527
Unannotated protein.
   
 0.757
MNAB215_721
Unannotated protein; Belongs to the group II decarboxylase family.
    
 0.756
MNAB215_4899
Unannotated protein.
    
 0.736
MNAB215_3930
Unannotated protein.
    
 0.732
MNAB215_4303
Unannotated protein; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.732
MNAB215_3307
Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.700
MNAB215_5423
Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
   0.696
MNAB215_3761
Unannotated protein.
  
   0.668
Your Current Organism:
Mycobacterium sp. AB215
NCBI taxonomy Id: 1841861
Other names: M. sp. AB215
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.