STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900170005_01927Unannotated protein. (289 aa)    
Predicted Functional Partners:
GCA_900170005_01928
Unannotated protein.
 0.987
GCA_900170005_01672
Unannotated protein.
 0.961
GCA_900170005_01929
Unannotated protein.
 
  0.961
GCA_900170005_03177
Unannotated protein.
 0.959
GCA_900170005_03178
Unannotated protein.
 0.959
GCA_900170005_00542
Unannotated protein.
 0.955
GCA_900170005_03176
Unannotated protein.
 
 0.908
GCA_900170005_00023
Unannotated protein.
 
 0.902
GCA_900170005_00543
Unannotated protein.
 
  0.893
GCA_900170005_01673
Unannotated protein.
 
  0.888
Your Current Organism:
Gordonibacter massiliensis
NCBI taxonomy Id: 1841863
Other names: CSUR P2775, G. massiliensis, Gordonibacter sp. Marseille-P2775, strain Marseille-P2775
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.