STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900170005_02842Unannotated protein. (110 aa)    
Predicted Functional Partners:
GCA_900170005_02843
Unannotated protein.
 
    0.946
GCA_900170005_00296
Unannotated protein.
    
  0.789
GCA_900170005_03056
Unannotated protein.
  
     0.770
GCA_900170005_00226
Unannotated protein.
  
     0.729
GCA_900170005_03057
Unannotated protein.
  
     0.625
GCA_900170005_03198
Unannotated protein.
  
 
  0.478
GCA_900170005_01999
Unannotated protein.
  
 
 0.457
Your Current Organism:
Gordonibacter massiliensis
NCBI taxonomy Id: 1841863
Other names: CSUR P2775, G. massiliensis, Gordonibacter sp. Marseille-P2775, strain Marseille-P2775
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.