STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900128475_01078Unannotated protein. (402 aa)    
Predicted Functional Partners:
GCA_900128475_01079
Unannotated protein.
       0.773
GCA_900128475_01080
Unannotated protein.
 
     0.754
GCA_900128475_01400
Unannotated protein.
  
     0.683
GCA_900128475_01081
Unannotated protein.
       0.664
GCA_900128475_02173
Unannotated protein.
  
     0.647
GCA_900128475_02166
Unannotated protein.
  
     0.643
GCA_900128475_00231
Unannotated protein.
  
     0.640
GCA_900128475_01793
Unannotated protein.
  
     0.606
GCA_900128475_02787
Unannotated protein.
  
     0.585
GCA_900128475_03435
Unannotated protein.
  
     0.569
Your Current Organism:
Mediterranea massiliensis
NCBI taxonomy Id: 1841865
Other names: CSUR P2645, DSM 103034, M. massiliensis, Mogibacterium sp. Marseille-P2645, strain Marseille-P2645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.