STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900128475_01440Unannotated protein. (444 aa)    
Predicted Functional Partners:
GCA_900128475_00930
Unannotated protein.
  
 0.804
GCA_900128475_02767
Unannotated protein.
  
 
 0.756
GCA_900128475_01441
Unannotated protein.
   
   0.727
GCA_900128475_01381
Unannotated protein.
  
 
 0.587
GCA_900128475_00444
Unannotated protein.
   
 0.576
GCA_900128475_00443
Unannotated protein.
    
 0.567
GCA_900128475_01681
Unannotated protein.
     
 0.534
GCA_900128475_01889
Unannotated protein.
     
 0.534
GCA_900128475_01439
Unannotated protein.
       0.522
GCA_900128475_00598
Unannotated protein.
    
  0.508
Your Current Organism:
Mediterranea massiliensis
NCBI taxonomy Id: 1841865
Other names: CSUR P2645, DSM 103034, M. massiliensis, Mogibacterium sp. Marseille-P2645, strain Marseille-P2645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.