STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104615_00109Unannotated protein. (404 aa)    
Predicted Functional Partners:
GCA_900104615_00108
Unannotated protein.
 
 0.997
GCA_900104615_00107
Unannotated protein.
 
  
 0.921
GCA_900104615_00111
Unannotated protein.
  
    0.823
GCA_900104615_00101
Unannotated protein.
 
   
 0.814
GCA_900104615_00110
Unannotated protein.
       0.784
GCA_900104615_01507
Unannotated protein.
 
    0.776
GCA_900104615_00106
Unannotated protein.
       0.740
GCA_900104615_00104
Unannotated protein.
  
    0.685
GCA_900104615_00105
Unannotated protein.
  
    0.682
GCA_900104615_00102
Unannotated protein.
       0.677
Your Current Organism:
Phocea massiliensis
NCBI taxonomy Id: 1841867
Other names: Anaerotruncus sp. Marseille-P2769, CSUR P2769, DSM 103073, P. massiliensis, strain Marseille-P2769
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.