STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104615_00513Unannotated protein. (344 aa)    
Predicted Functional Partners:
GCA_900104615_00514
Unannotated protein.
 0.999
GCA_900104615_00515
Unannotated protein.
 0.999
GCA_900104615_00086
Unannotated protein.
 
   
 0.910
GCA_900104615_01737
Unannotated protein.
 
   
 
0.908
GCA_900104615_01290
Unannotated protein.
   
  0.907
GCA_900104615_01303
Unannotated protein.
 
      0.898
GCA_900104615_01738
Unannotated protein.
   
  0.891
GCA_900104615_02127
Unannotated protein.
 
      0.875
GCA_900104615_00219
Unannotated protein.
   
 
 0.873
GCA_900104615_01203
Unannotated protein.
 
  
 
0.726
Your Current Organism:
Phocea massiliensis
NCBI taxonomy Id: 1841867
Other names: Anaerotruncus sp. Marseille-P2769, CSUR P2769, DSM 103073, P. massiliensis, strain Marseille-P2769
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.