STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104615_00871Unannotated protein. (726 aa)    
Predicted Functional Partners:
GCA_900104615_00872
Unannotated protein.
     
 0.852
GCA_900104615_00833
Unannotated protein.
    
  0.822
GCA_900104615_00836
Unannotated protein.
    
  0.822
GCA_900104615_00870
Unannotated protein.
 
 
   0.767
GCA_900104615_01389
Unannotated protein.
 
 
 0.741
GCA_900104615_02145
Unannotated protein.
  
     0.741
GCA_900104615_00868
Unannotated protein.
 
   
 0.694
GCA_900104615_00728
Unannotated protein.
 
  
 0.622
GCA_900104615_02144
Unannotated protein.
  
     0.616
GCA_900104615_02322
Unannotated protein.
    
 0.611
Your Current Organism:
Phocea massiliensis
NCBI taxonomy Id: 1841867
Other names: Anaerotruncus sp. Marseille-P2769, CSUR P2769, DSM 103073, P. massiliensis, strain Marseille-P2769
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.