STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900104615_00910Unannotated protein. (292 aa)    
Predicted Functional Partners:
GCA_900104615_00908
Unannotated protein.
 
    0.891
GCA_900104615_00909
Unannotated protein.
 
    0.815
GCA_900104615_00907
Unannotated protein.
  
  
 0.806
GCA_900104615_00906
Unannotated protein.
  
    0.525
GCA_900104615_00905
Unannotated protein.
  
    0.492
GCA_900104615_00586
Unannotated protein.
  
    0.483
GCA_900104615_00903
Unannotated protein.
 
    0.471
GCA_900104615_00911
Unannotated protein.
       0.433
GCA_900104615_00912
Unannotated protein.
 
    0.429
GCA_900104615_00904
Unannotated protein.
       0.418
Your Current Organism:
Phocea massiliensis
NCBI taxonomy Id: 1841867
Other names: Anaerotruncus sp. Marseille-P2769, CSUR P2769, DSM 103073, P. massiliensis, strain Marseille-P2769
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.