STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900169495_00478Unannotated protein. (141 aa)    
Predicted Functional Partners:
GCA_900169495_02428
Unannotated protein.
  
 
 0.878
GCA_900169495_00807
Unannotated protein.
   
 
 0.828
GCA_900169495_00477
Unannotated protein.
       0.615
GCA_900169495_01323
Unannotated protein.
  
 
 0.585
GCA_900169495_00457
Unannotated protein.
  
  
 0.553
GCA_900169495_01010
Unannotated protein.
  
  
 0.550
GCA_900169495_01975
Unannotated protein.
  
  
 0.545
GCA_900169495_00479
Unannotated protein.
       0.516
GCA_900169495_00473
Unannotated protein.
 
  
 0.507
GCA_900169495_01417
Unannotated protein.
  
  
 0.485
Your Current Organism:
Provencibacterium massiliense
NCBI taxonomy Id: 1841868
Other names: CSUR P2780, P. massiliense, Ruminococcus sp. Marseille-P2780, strain Marseille-P2780
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.