STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG27650.1(4Fe-4S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)    
Predicted Functional Partners:
APG27652.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.929
APG27649.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.927
APG27651.1
(4Fe-4S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.870
APG28790.1
MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.751
APG26781.1
MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.749
A7E78_11270
Phosphoglycerate dehydrogenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.705
APG27757.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.688
nuoD
NADH dehydrogenase (quinone) subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. In the C-terminal section; belongs to the complex I 49 kDa subunit family.
    
 0.620
APG28533.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.566
APG27484.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.490
Your Current Organism:
Pelobacter sp. SFB93
NCBI taxonomy Id: 1842532
Other names: P. sp. SFB93
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.