STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOG25320.1Rhodanese-like domain protein; [P] COG0607 Rhodanese-related sulfurtransferase. (115 aa)    
Predicted Functional Partners:
AOG24847.1
Met-10+ like-family protein; [O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase.
       0.808
AOG24647.1
type_I_sec_TolC: type I secretion outer membrane, TolC family protein; [MU] COG1538 Outer membrane protein.
       0.675
AOG23877.1
Bacterial regulatory s, tetR family protein; [K] COG1309 Transcriptional regulator.
       0.595
AOG21974.1
RND_mfp: efflux transporter, RND family, MFP subunit; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.595
AOG23193.1
acrB/AcrD/AcrF family protein; [V] COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.590
ybeY
Putative rRNA maturation factor YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
   0.583
AOG23097.1
Rhodanese-like domain protein; [P] COG0607 Rhodanese-related sulfurtransferase.
  
  
 0.572
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.565
rplQ
L17: ribosomal protein L17; [J] COG0203 Ribosomal protein L17.
  
   0.545
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
 
 0.539
Your Current Organism:
Acidovorax sp. RAC01
NCBI taxonomy Id: 1842533
Other names: A. sp. RAC01
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.