STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOG11313.1Porin subfamily protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (334 aa)    
Predicted Functional Partners:
AOG10965.1
Putative transmembrane protein.
  
     0.774
AOG09175.1
apolipoA1/A4/E domain protein.
  
     0.773
AOG12235.1
Conserved hypothetical protein; [S] COG3184 Uncharacterized protein conserved in bacteria.
  
     0.769
AOG09231.1
Conserved hypothetical protein; [S] COG5568 Uncharacterized small protein.
  
     0.767
AOG10606.1
Hypothetical protein.
  
     0.765
AOG12225.1
Putative membrane protein.
  
     0.763
AOG09185.1
Hypothetical protein.
  
     0.758
AOG08372.1
Hypothetical protein.
  
     0.757
AOG11138.1
Conserved hypothetical protein; [S] COG4093 Uncharacterized protein conserved in bacteria.
  
     0.754
AOG11043.1
[R] COG0790 FOG: TPR repeat, SEL1 subfamily.
  
     0.750
Your Current Organism:
Agrobacterium sp. RAC06
NCBI taxonomy Id: 1842536
Other names: A. sp. RAC06
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