STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOG11325.1Hypothetical protein; Bacterial transglutaminase-like N-terminal region family protein; [S] COG4196 Uncharacterized protein conserved in bacteria. (1114 aa)    
Predicted Functional Partners:
AOG08167.1
A circularly permuted ATPgrasp family protein; [S] COG2308 Uncharacterized conserved protein.
 
  
 0.982
AOG09891.1
Hypothetical protein; Bacterial transglutaminase-like N-terminal region family protein; [E] COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
 
    
0.858
AOG11957.1
A circularly permuted ATPgrasp family protein; [S] COG2308 Uncharacterized conserved protein.
 
  
 0.763
AOG12329.1
Hypothetical protein; A predicted alpha-helical domain with a conserved ER motif family protein; [S] COG2307 Uncharacterized protein conserved in bacteria.
 
  
 0.746
AOG09153.1
Transglutaminase-like superfamily protein; [E] COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
 
     0.745
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.730
AOG10700.1
Conserved hypothetical protein; [S] COG4307 Uncharacterized protein conserved in bacteria.
 
     0.711
AOG12260.1
HAD-SF-IA-v1: HAD hydrolase, IA, variant 1 family protein; [R] COG0546 Predicted phosphatases.
    
  0.663
AOG08387.1
[R] COG0121 Predicted glutamine amidotransferase.
   
 
  0.662
AOG10903.1
Glutamine amidotransferase class-I family protein; [F] COG0518 GMP synthase - Glutamine amidotransferase domain.
  
 
  0.659
Your Current Organism:
Agrobacterium sp. RAC06
NCBI taxonomy Id: 1842536
Other names: A. sp. RAC06
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