STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOG09414.1Conserved hypothetical protein; [S] COG2929 Uncharacterized protein conserved in bacteria. (90 aa)    
Predicted Functional Partners:
AOG10181.1
Conserved hypothetical protein; [K] COG2944 Predicted transcriptional regulator.
 
     0.915
AOG11459.1
Conserved hypothetical protein; [S] COG2929 Uncharacterized protein conserved in bacteria.
  
     0.575
AOG08123.1
[R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.530
AOG10877.1
Conserved hypothetical protein; [S] COG3514 Uncharacterized protein conserved in bacteria.
 
   0.500
AOG11692.1
Conserved hypothetical protein; [S] COG3514 Uncharacterized protein conserved in bacteria.
  
   0.467
AOG12304.1
Hypothetical protein.
 
  
 0.442
AOG10478.1
Conserved hypothetical protein; [S] COG3514 Uncharacterized protein conserved in bacteria.
  
   0.428
AOG09191.1
Conserved hypothetical protein; [S] COG3514 Uncharacterized protein conserved in bacteria.
  
   0.417
Your Current Organism:
Agrobacterium sp. RAC06
NCBI taxonomy Id: 1842536
Other names: A. sp. RAC06
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