Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AOG11282.1 | rbsK | BSY240_2402 | BSY240_2400 | [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase. | Phosphomethylpyrimidine kinase family protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.772 |
| AOG11282.1 | rbsK-2 | BSY240_2402 | BSY240_68 | [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase. | Carbohydrate kinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.770 |
| AOG11567.1 | AOG11612.1 | BSY240_2264 | BSY240_2263 | Transketolase, pyrimidine binding domain protein; [G] COG3958 Transketolase, C-terminal subunit. | Transketolase, thiamine diphosphate binding domain protein; [G] COG3959 Transketolase, N-terminal subunit. | 0.999 |
| AOG11567.1 | deoB | BSY240_2264 | BSY240_2628 | Transketolase, pyrimidine binding domain protein; [G] COG3958 Transketolase, C-terminal subunit. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.900 |
| AOG11567.1 | deoC | BSY240_2264 | BSY240_2623 | Transketolase, pyrimidine binding domain protein; [G] COG3958 Transketolase, C-terminal subunit. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. | 0.903 |
| AOG11567.1 | pgm | BSY240_2264 | BSY240_3944 | Transketolase, pyrimidine binding domain protein; [G] COG3958 Transketolase, C-terminal subunit. | [G] COG0033 Phosphoglucomutase. | 0.900 |
| AOG11567.1 | prs | BSY240_2264 | BSY240_4373 | Transketolase, pyrimidine binding domain protein; [G] COG3958 Transketolase, C-terminal subunit. | Ribose-phosphate diphosphokinase family protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.910 |
| AOG11567.1 | rbsK | BSY240_2264 | BSY240_2400 | Transketolase, pyrimidine binding domain protein; [G] COG3958 Transketolase, C-terminal subunit. | Phosphomethylpyrimidine kinase family protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.903 |
| AOG11567.1 | rbsK-2 | BSY240_2264 | BSY240_68 | Transketolase, pyrimidine binding domain protein; [G] COG3958 Transketolase, C-terminal subunit. | Carbohydrate kinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.903 |
| AOG11567.1 | rpiA | BSY240_2264 | BSY240_336 | Transketolase, pyrimidine binding domain protein; [G] COG3958 Transketolase, C-terminal subunit. | Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.964 |
| AOG11567.1 | tkt | BSY240_2264 | BSY240_4030 | Transketolase, pyrimidine binding domain protein; [G] COG3958 Transketolase, C-terminal subunit. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.942 |
| AOG11612.1 | AOG11567.1 | BSY240_2263 | BSY240_2264 | Transketolase, thiamine diphosphate binding domain protein; [G] COG3959 Transketolase, N-terminal subunit. | Transketolase, pyrimidine binding domain protein; [G] COG3958 Transketolase, C-terminal subunit. | 0.999 |
| AOG11612.1 | deoB | BSY240_2263 | BSY240_2628 | Transketolase, thiamine diphosphate binding domain protein; [G] COG3959 Transketolase, N-terminal subunit. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.907 |
| AOG11612.1 | deoC | BSY240_2263 | BSY240_2623 | Transketolase, thiamine diphosphate binding domain protein; [G] COG3959 Transketolase, N-terminal subunit. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. | 0.903 |
| AOG11612.1 | pgm | BSY240_2263 | BSY240_3944 | Transketolase, thiamine diphosphate binding domain protein; [G] COG3959 Transketolase, N-terminal subunit. | [G] COG0033 Phosphoglucomutase. | 0.900 |
| AOG11612.1 | prs | BSY240_2263 | BSY240_4373 | Transketolase, thiamine diphosphate binding domain protein; [G] COG3959 Transketolase, N-terminal subunit. | Ribose-phosphate diphosphokinase family protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.910 |
| AOG11612.1 | rbsK | BSY240_2263 | BSY240_2400 | Transketolase, thiamine diphosphate binding domain protein; [G] COG3959 Transketolase, N-terminal subunit. | Phosphomethylpyrimidine kinase family protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.905 |
| AOG11612.1 | rbsK-2 | BSY240_2263 | BSY240_68 | Transketolase, thiamine diphosphate binding domain protein; [G] COG3959 Transketolase, N-terminal subunit. | Carbohydrate kinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.905 |
| AOG11612.1 | rpiA | BSY240_2263 | BSY240_336 | Transketolase, thiamine diphosphate binding domain protein; [G] COG3959 Transketolase, N-terminal subunit. | Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.964 |
| AOG11612.1 | tkt | BSY240_2263 | BSY240_4030 | Transketolase, thiamine diphosphate binding domain protein; [G] COG3959 Transketolase, N-terminal subunit. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.921 |
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