STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOF84313.1hpcH/HpaI aldolase/citrate lyase family protein; [G] COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. (281 aa)    
Predicted Functional Partners:
AOF86879.1
hpcH/HpaI aldolase/citrate lyase family protein; [G] COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
  
  
 
0.936
AOF87402.1
mmgE/PrpD family protein; [R] COG2079 Uncharacterized protein involved in propionate catabolism.
 
  
 0.922
AOF85009.1
[C] COG0372 Citrate synthase.
    
 0.880
AOF83942.1
coA-transferase III family protein; [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.
 
 
 0.857
AOF87862.1
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein; [I] COG1960 Acyl-CoA dehydrogenases.
 
  
 0.822
AOF85464.1
maoC like domain protein; [I] COG2030 Acyl dehydratase.
 
 
 0.761
AOF87552.1
coA-transferase III family protein; [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.
  
 
 0.650
BSY239_26
Hypothetical protein; Class II Aldolase and Adducin N-terminal domain protein; [G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
  
    0.643
AOF84582.1
ac_ac_CoA_syn: acetoacetate-CoA ligase; [I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
    
 0.618
AOF87587.1
mmgE/PrpD family protein; [R] COG2079 Uncharacterized protein involved in propionate catabolism.
 
  
 0.608
Your Current Organism:
Hydrogenophaga sp. RAC07
NCBI taxonomy Id: 1842537
Other names: H. sp. RAC07
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